J3_4U26_066

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CAAUGG*UCGUAGUCCGGAUUGG*CCAUGAAGUCG

Length

33 nucleotides

Bulged bases

4U26|1|CA|U|1240, 4U26|1|CA|U|1298

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U26|1|CA|C|1237
4U26|1|CA|A|1238
4U26|1|CA|A|1239
4U26|1|CA|U|1240
4U26|1|CA|G|1241
4U26|1|CA|G|1242
*
4U26|1|CA|U|1295
4U26|1|CA|C|1296
4U26|1|CA|G|1297
4U26|1|CA|U|1298
4U26|1|CA|A|1299
4U26|1|CA|G|1300
4U26|1|CA|U|1301
4U26|1|CA|C|1302
4U26|1|CA|C|1303
4U26|1|CA|G|1304
4U26|1|CA|G|1305
4U26|1|CA|A|1306
4U26|1|CA|U|1307
4U26|1|CA|U|1308
4U26|1|CA|G|1309
4U26|1|CA|G|1310
*
4U26|1|CA|C|1327
4U26|1|CA|C|1328
4U26|1|CA|A|1329
4U26|1|CA|U|1330
4U26|1|CA|G|1331
4U26|1|CA|A|1332
4U26|1|CA|A|1333
4U26|1|CA|G|1334
4U26|1|CA|U|1335
4U26|1|CA|C|1336
4U26|1|CA|G|1337

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CG

30S ribosomal protein S7

Chain CM

30S ribosomal protein S13

Chain CS

30S ribosomal protein S19