J3_4U27_073

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCC*GGCGAAAAGAAC*GAGUGAAAAAGAACC

Length

30 nucleotides

Bulged bases

4U27|1|DA|A|504, 4U27|1|DA|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U27|1|DA|G|30
4U27|1|DA|C|31
4U27|1|DA|C|32
*
4U27|1|DA|G|473
4U27|1|DA|G|474
4U27|1|DA|C|475
4U27|1|DA|G|476
4U27|1|DA|A|477
4U27|1|DA|A|478
4U27|1|DA|A|479
4U27|1|DA|A|480
4U27|1|DA|G|481
4U27|1|DA|A|482
4U27|1|DA|A|483
4U27|1|DA|C|484
*
4U27|1|DA|G|496
4U27|1|DA|A|497
4U27|1|DA|G|498
4U27|1|DA|U|499
4U27|1|DA|G|500
4U27|1|DA|A|501
4U27|1|DA|A|502
4U27|1|DA|A|503
4U27|1|DA|A|504
4U27|1|DA|A|505
4U27|1|DA|G|506
4U27|1|DA|A|507
4U27|1|DA|A|508
4U27|1|DA|C|509
4U27|1|DA|C|510

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DQ

50S ribosomal protein L20

Chain DS

50S ribosomal protein L22

Chain DU

50S ribosomal protein L24