J3_4U4O_098
3D structure
- PDB id
- 4U4O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Geneticin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CCAG*CUAGUAAG*UUGAUUACG
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U4O|1|6|C|1161
4U4O|1|6|C|1162
4U4O|1|6|A|1163
4U4O|1|6|G|1164
*
4U4O|1|6|C|1581
4U4O|1|6|U|1582
4U4O|1|6|A|1583
4U4O|1|6|G|1584
4U4O|1|6|U|1585
4U4O|1|6|A|1586
4U4O|1|6|A|1587
4U4O|1|6|G|1588
*
4U4O|1|6|U|1608
4U4O|1|6|U|1609
4U4O|1|6|G|1610
4U4O|1|6|A|1611
4U4O|1|6|U|1612
4U4O|1|6|U|1613
4U4O|1|6|A|1614
4U4O|1|6|C|1615
4U4O|1|6|G|1616
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c6
- 40S ribosomal protein S16-A
- Chain d8
- 40S ribosomal protein S28-A
- Chain s5
- 40S ribosomal protein S5
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