J3_4U4O_103
3D structure
- PDB id
- 4U4O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Geneticin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CACUGA*UCGUGCUGG*CGAG
- Length
- 19 nucleotides
- Bulged bases
- 4U4O|1|6|U|1473, 4U4O|1|6|G|1539
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U4O|1|6|C|1470
4U4O|1|6|A|1471
4U4O|1|6|C|1472
4U4O|1|6|U|1473
4U4O|1|6|G|1474
4U4O|1|6|A|1475
*
4U4O|1|6|U|1532
4U4O|1|6|C|1533
4U4O|1|6|G|1534
4U4O|1|6|U|1535
4U4O|1|6|G|1536
4U4O|1|6|C|1537
4U4O|1|6|U|1538
4U4O|1|6|G|1539
4U4O|1|6|G|1540
*
4U4O|1|6|C|1571
4U4O|1|6|G|1572
4U4O|1|6|A|1573
4U4O|1|6|G|1574
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c8
- 40S ribosomal protein S18-A
- Chain c9
- 40S ribosomal protein S19-A
- Chain d5
- 40S ribosomal protein S25-A
- Chain s5
- 40S ribosomal protein S5
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