J3_4U4Y_036
3D structure
- PDB id
- 4U4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Pactamycin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GACG*CGCUAAGG*CAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U4Y|1|5|G|1230
4U4Y|1|5|A|1231
4U4Y|1|5|C|1232
4U4Y|1|5|G|1233
*
4U4Y|1|5|C|1255
4U4Y|1|5|G|1256
4U4Y|1|5|C|1257
4U4Y|1|5|U|1258
4U4Y|1|5|A|1259
4U4Y|1|5|A|1260
4U4Y|1|5|G|1261
4U4Y|1|5|G|1262
*
4U4Y|1|5|C|1277
4U4Y|1|5|A|1278
4U4Y|1|5|C|1279
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain m2
- unknown protein chain m2
- Chain p0
- 60S acidic ribosomal protein P0
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