J3_4U4Z_020

3D structure

PDB id

4U4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Phyllanthoside bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUAG*CUUACG*CAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4Z|1|2|C|1037
4U4Z|1|2|U|1038
4U4Z|1|2|A|1039
4U4Z|1|2|G|1040
*
4U4Z|1|2|C|1078
4U4Z|1|2|U|1079
4U4Z|1|2|U|1080
4U4Z|1|2|A|1081
4U4Z|1|2|C|1082
4U4Z|1|2|G|1083
*
4U4Z|1|2|C|1090
4U4Z|1|2|A|1091
4U4Z|1|2|A|1092
4U4Z|1|2|A|1093
4U4Z|1|2|G|1094

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D1

40S ribosomal protein S21-A

Chain D2

40S ribosomal protein S22-A

Chain D3

40S ribosomal protein S23-A

Chain D6

40S ribosomal protein S26-B

Chain D7

40S ribosomal protein S27-A

Chain S0

40S ribosomal protein S0-A