J3_4U53_072
3D structure
- PDB id
- 4U53 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAUUUG*CUUAGAUGUA*UCUG
- Length
- 20 nucleotides
- Bulged bases
- 4U53|1|1|U|3319
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4U53|1|1|C|3298
4U53|1|1|A|3299
4U53|1|1|U|3300
4U53|1|1|U|3301
4U53|1|1|U|3302
4U53|1|1|G|3303
*
4U53|1|1|C|3311
4U53|1|1|U|3312
4U53|1|1|U|3313
4U53|1|1|A|3314
4U53|1|1|G|3315
4U53|1|1|A|3316
4U53|1|1|U|3317
4U53|1|1|G|3318
4U53|1|1|U|3319
4U53|1|1|A|3320
*
4U53|1|1|U|3387
4U53|1|1|C|3388
4U53|1|1|U|3389
4U53|1|1|G|3390
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain L3
- 60S ribosomal protein L3
- Chain M7
- 60S ribosomal protein L17-A
- Chain O1
- 60S ribosomal protein L31-A
Coloring options: