J3_4U55_065

3D structure

PDB id

4U55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Cryptopleurine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GACGGUGGCC*GGAAUCCGCUAAGG*CAC

Length

27 nucleotides

Bulged bases

4U55|1|1|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U55|1|1|G|1230
4U55|1|1|A|1231
4U55|1|1|C|1232
4U55|1|1|G|1233
4U55|1|1|G|1234
4U55|1|1|U|1235
4U55|1|1|G|1236
4U55|1|1|G|1237
4U55|1|1|C|1238
4U55|1|1|C|1239
*
4U55|1|1|G|1249
4U55|1|1|G|1250
4U55|1|1|A|1251
4U55|1|1|A|1252
4U55|1|1|U|1253
4U55|1|1|C|1254
4U55|1|1|C|1255
4U55|1|1|G|1256
4U55|1|1|C|1257
4U55|1|1|U|1258
4U55|1|1|A|1259
4U55|1|1|A|1260
4U55|1|1|G|1261
4U55|1|1|G|1262
*
4U55|1|1|C|1277
4U55|1|1|A|1278
4U55|1|1|C|1279

Current chains

Chain 1

25S ribosomal RNA

Nearby chains