J3_4UE4_001

3D structure

PDB id

4UE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for targeting and elongation arrest of Bacillus signal recognition particle

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

CUAAG*CCGAAUCC*GUG

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4UE4_001 not in the Motif Atlas

Homologous match to J3_4WFL_001

Geometric discrepancy: 0.2933

The information below is about J3_4WFL_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_36387.1

Basepair signature

cWW-F-F-F-tWW-tHW-tHW-cWW-F-F-cWW

Number of instances in this motif group

1

Unit IDs

4UE4|1|A|C|10
4UE4|1|A|U|11
4UE4|1|A|A|12
4UE4|1|A|A|13
4UE4|1|A|G|14
*
4UE4|1|A|C|60
4UE4|1|A|C|61
4UE4|1|A|G|62
4UE4|1|A|A|63
4UE4|1|A|A|64
4UE4|1|A|U|65
4UE4|1|A|C|66
4UE4|1|A|C|67
*
4UE4|1|A|G|261
4UE4|1|A|U|262
4UE4|1|A|G|263

Current chains

Chain A

6S RNA

Nearby chains