J3_4V4G_010

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GCCUUGACAU*ACAG*CUUACGGC

Length

22 nucleotides

Bulged bases

4V4G|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|AA|G|988
4V4G|1|AA|C|989
4V4G|1|AA|C|990
4V4G|1|AA|U|991
4V4G|1|AA|U|992
4V4G|1|AA|G|993
4V4G|1|AA|A|994
4V4G|1|AA|C|995
4V4G|1|AA|A|996
4V4G|1|AA|U|997
*
4V4G|1|AA|A|1044
4V4G|1|AA|C|1045
4V4G|1|AA|A|1046
4V4G|1|AA|G|1047
*
4V4G|1|AA|C|1210
4V4G|1|AA|U|1211
4V4G|1|AA|U|1212
4V4G|1|AA|A|1213
4V4G|1|AA|C|1214
4V4G|1|AA|G|1215
4V4G|1|AA|G|1216
4V4G|1|AA|C|1217

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19