J3_4V4G_026

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GGUUC*GGAAAGUC*GUAC

Length

17 nucleotides

Bulged bases

4V4G|1|BB|G|1324, 4V4G|1|BB|U|1325, 4V4G|1|BB|A|1354

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|BB|G|1323
4V4G|1|BB|G|1324
4V4G|1|BB|U|1325
4V4G|1|BB|U|1326
4V4G|1|BB|C|1327
*
4V4G|1|BB|G|1351
4V4G|1|BB|G|1352
4V4G|1|BB|A|1353
4V4G|1|BB|A|1354
4V4G|1|BB|A|1355
4V4G|1|BB|G|1356
4V4G|1|BB|U|1357
4V4G|1|BB|C|1358
*
4V4G|1|BB|G|1617
4V4G|1|BB|U|1618
4V4G|1|BB|A|1619
4V4G|1|BB|C|1620

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B4

50S ribosomal protein L34

Chain BU

50S ribosomal protein L23