J3_4V4G_083

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

UGAGCUAAGCA*UGUUUAGGAG*CUAACCGAA

Length

30 nucleotides

Bulged bases

4V4G|1|FB|G|699, 4V4G|1|FB|A|787, 4V4G|1|FB|A|802, 4V4G|1|FB|C|803, 4V4G|1|FB|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|FB|U|696
4V4G|1|FB|G|697
4V4G|1|FB|A|698
4V4G|1|FB|G|699
4V4G|1|FB|C|700
4V4G|1|FB|U|701
4V4G|1|FB|A|702
4V4G|1|FB|A|703
4V4G|1|FB|G|704
4V4G|1|FB|C|705
4V4G|1|FB|A|706
*
4V4G|1|FB|U|782
4V4G|1|FB|G|783
4V4G|1|FB|U|784
4V4G|1|FB|U|785
4V4G|1|FB|U|786
4V4G|1|FB|A|787
4V4G|1|FB|G|788
4V4G|1|FB|G|789
4V4G|1|FB|A|790
4V4G|1|FB|G|791
*
4V4G|1|FB|C|799
4V4G|1|FB|U|800
4V4G|1|FB|A|801
4V4G|1|FB|A|802
4V4G|1|FB|C|803
4V4G|1|FB|C|804
4V4G|1|FB|G|805
4V4G|1|FB|A|806
4V4G|1|FB|A|807

Current chains

Chain FB

23S RIBOSOMAL RNA

Nearby chains

Chain F4

50S ribosomal protein L34

Chain FD

50S ribosomal protein L2

Chain FF

50S ribosomal protein L4