J3_4V4G_113

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CGAAGUG*UACACCUCAGAAG*CUGUAG

Length

26 nucleotides

Bulged bases

4V4G|1|HB|C|332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|HB|C|308
4V4G|1|HB|G|309
4V4G|1|HB|A|310
4V4G|1|HB|A|311
4V4G|1|HB|G|312
4V4G|1|HB|U|313
4V4G|1|HB|G|314
*
4V4G|1|HB|U|325
4V4G|1|HB|A|326
4V4G|1|HB|C|327
4V4G|1|HB|A|328
4V4G|1|HB|C|329
4V4G|1|HB|C|330
4V4G|1|HB|U|331
4V4G|1|HB|C|332
4V4G|1|HB|A|333
4V4G|1|HB|G|334
4V4G|1|HB|A|335
4V4G|1|HB|A|336
4V4G|1|HB|G|337
*
4V4G|1|HB|C|347
4V4G|1|HB|U|348
4V4G|1|HB|G|349
4V4G|1|HB|U|350
4V4G|1|HB|A|351
4V4G|1|HB|G|352

Current chains

Chain HB

23S RIBOSOMAL RNA

Nearby chains

Chain HF

50S ribosomal protein L4

Chain HV

50S ribosomal protein L24