J3_4V4G_163

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

AUUCA*UGUAAC*GGACCGU

Length

18 nucleotides

Bulged bases

4V4G|1|BB|U|2074, 4V4G|1|BB|A|2181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|BB|A|2073
4V4G|1|BB|U|2074
4V4G|1|BB|U|2075
4V4G|1|BB|C|3093
4V4G|1|BB|A|3094
*
4V4G|1|BB|U|3195
4V4G|1|BB|G|3196
4V4G|1|BB|U|3197
4V4G|1|BB|A|2181
4V4G|1|BB|A|2182
4V4G|1|BB|C|2183
*
4V4G|1|BB|G|2202
4V4G|1|BB|G|2203
4V4G|1|BB|A|2204
4V4G|1|BB|C|2205
4V4G|1|BB|C|2206
4V4G|1|BB|G|2207
4V4G|1|BB|U|2208

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B1

50S ribosomal protein L31

Chain BD

50S ribosomal protein L2

Chain BI

50S ribosomal protein L9