J3_4V4G_169

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CCAGG*CCGAAC*GAUGAG

Length

17 nucleotides

Bulged bases

4V4G|1|DB|U|775, 4V4G|1|DB|A|777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|DB|C|710
4V4G|1|DB|C|711
4V4G|1|DB|A|712
4V4G|1|DB|G|713
4V4G|1|DB|G|714
*
4V4G|1|DB|C|744
4V4G|1|DB|C|745
4V4G|1|DB|G|746
4V4G|1|DB|A|747
4V4G|1|DB|A|748
4V4G|1|DB|C|749
*
4V4G|1|DB|G|773
4V4G|1|DB|A|774
4V4G|1|DB|U|775
4V4G|1|DB|G|776
4V4G|1|DB|A|777
4V4G|1|DB|G|778

Current chains

Chain DB

23S RIBOSOMAL RNA

Nearby chains

Chain DD

50S ribosomal protein L2