J3_4V4R_037
3D structure
- PDB id
- 4V4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the whole ribosomal complex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5.9 Å
Loop
- Sequence
- AGGGUAGAAGGGGGCCUGAC*GGG*CGGGCCU
- Length
- 30 nucleotides
- Bulged bases
- 4V4R|1|BA|G|2334, 4V4R|1|BA|A|2336, 4V4R|1|BA|U|2344
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4R|1|BA|A|2328
4V4R|1|BA|G|2329
4V4R|1|BA|G|2330
4V4R|1|BA|G|2331
4V4R|1|BA|U|2332
4V4R|1|BA|A|2333
4V4R|1|BA|G|2334
4V4R|1|BA|A|2335
4V4R|1|BA|A|2336
4V4R|1|BA|G|2337
4V4R|1|BA|G|2338
4V4R|1|BA|G|2339
4V4R|1|BA|G|2340
4V4R|1|BA|G|2341
4V4R|1|BA|C|2342
4V4R|1|BA|C|2343
4V4R|1|BA|U|2344
4V4R|1|BA|G|2345
4V4R|1|BA|A|2346
4V4R|1|BA|C|2347
*
4V4R|1|BA|G|2370
4V4R|1|BA|G|2371
4V4R|1|BA|G|2372
*
4V4R|1|BA|C|2381
4V4R|1|BA|G|2382
4V4R|1|BA|G|2383
4V4R|1|BA|G|2384
4V4R|1|BA|C|2385
4V4R|1|BA|C|2386
4V4R|1|BA|U|2387
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AV
- Transfer RNA; tRNA
- Chain B0
- 50S ribosomal protein L27
- Chain B6
- 50S ribosomal protein L33
- Chain B8
- 50S ribosomal protein L35
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BQ
- 50S ribosomal protein L16
- Chain BS
- 50S ribosomal protein L18
Coloring options: