J3_4V4X_014
3D structure
- PDB id
- 4V4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 4V4X|1|BA|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V4X_014 not in the Motif Atlas
- Homologous match to J3_5J7L_037
- Geometric discrepancy: 0.3087
- The information below is about J3_5J7L_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V4X|1|BA|A|56
4V4X|1|BA|C|57
*
4V4X|1|BA|G|70
4V4X|1|BA|A|71
4V4X|1|BA|U|72
4V4X|1|BA|A|73
4V4X|1|BA|A|74
4V4X|1|BA|G|75
4V4X|1|BA|C|76
*
4V4X|1|BA|G|110
4V4X|1|BA|A|111
4V4X|1|BA|U|112
4V4X|1|BA|G|113
4V4X|1|BA|U|114
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 50S ribosomal protein L29
- Chain B6
- 50S ribosomal protein L34
- Chain BW
- 50S ribosomal protein L23
Coloring options: