3D structure

PDB id
4V4X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
Experimental method
X-RAY DIFFRACTION
Resolution
5 Å

Loop

Sequence
GGA*UUUAAAG*CAC
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4X|1|BA|G|1055
4V4X|1|BA|G|1056
4V4X|1|BA|A|1057
*
4V4X|1|BA|U|1081
4V4X|1|BA|U|1082
4V4X|1|BA|U|1083
4V4X|1|BA|A|1084
4V4X|1|BA|A|1085
4V4X|1|BA|A|1086
4V4X|1|BA|G|1087
*
4V4X|1|BA|C|1102
4V4X|1|BA|A|1103
4V4X|1|BA|C|1104

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BL
50S ribosomal protein L11

Coloring options:

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