3D structure

PDB id
4V4Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
Experimental method
X-RAY DIFFRACTION
Resolution
4.51 Å

Loop

Sequence
GUCAG*CGCAACC*GACGAC
Length
18 nucleotides
Bulged bases
4V4Z|1|AA|G|1190
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4Z|1|AA|G|1064
4V4Z|1|AA|U|1065
4V4Z|1|AA|C|1066
4V4Z|1|AA|A|1067
4V4Z|1|AA|G|1068
*
4V4Z|1|AA|C|1107
4V4Z|1|AA|G|1108
4V4Z|1|AA|C|1109
4V4Z|1|AA|A|1110
4V4Z|1|AA|A|1111
4V4Z|1|AA|C|1112
4V4Z|1|AA|C|1113
*
4V4Z|1|AA|G|1187
4V4Z|1|AA|A|1188
4V4Z|1|AA|C|1189
4V4Z|1|AA|G|1190
4V4Z|1|AA|A|1191
4V4Z|1|AA|C|1192

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AE
30S ribosomal protein S2
Chain AF
30S ribosomal protein S3
Chain AH
30S ribosomal protein S5
Chain AL
30S ribosomal protein S9
Chain AM
30S ribosomal protein S10
Chain AQ
30S ribosomal protein S14

Coloring options:

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