J3_4V4Z_026
3D structure
- PDB id
- 4V4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.51 Å
Loop
- Sequence
- CCAUAG*CGC*GUCG
- Length
- 13 nucleotides
- Bulged bases
- 4V4Z|1|BB|C|12, 4V4Z|1|BB|C|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4Z|1|BB|C|11
4V4Z|1|BB|C|12
4V4Z|1|BB|A|13
4V4Z|1|BB|U|14
4V4Z|1|BB|A|15
4V4Z|1|BB|G|16
*
4V4Z|1|BB|C|68
4V4Z|1|BB|G|69
4V4Z|1|BB|C|70
*
4V4Z|1|BB|G|106
4V4Z|1|BB|U|107
4V4Z|1|BB|C|108
4V4Z|1|BB|G|109
Current chains
- Chain BB
- 5S rRNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BP
- 50S RIBOSOMAL PROTEIN L16
- Chain BR
- 50S RIBOSOMAL PROTEIN L18
- Chain BY
- 50S RIBOSOMAL PROTEIN L25
- Chain BZ
- 50S RIBOSOMAL PROTEIN L27
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