3D structure

PDB id
4V53 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.54 Å

Loop

Sequence
GAAG*UGUGC*GAAC
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V53|1|AA|G|1003
4V53|1|AA|A|1004
4V53|1|AA|A|1005
4V53|1|AA|G|1006
*
4V53|1|AA|U|1023
4V53|1|AA|G|1024
4V53|1|AA|U|1025
4V53|1|AA|G|1026
4V53|1|AA|C|1027
*
4V53|1|AA|G|1034
4V53|1|AA|A|1035
4V53|1|AA|A|1036
4V53|1|AA|C|1037

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AN
30S ribosomal protein S14

Coloring options:

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