J3_4V57_064

3D structure

PDB id

4V57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4V57|1|CA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V57|1|CA|C|990
4V57|1|CA|U|991
4V57|1|CA|U|992
4V57|1|CA|G|993
4V57|1|CA|A|994
4V57|1|CA|C|995
4V57|1|CA|A|996
4V57|1|CA|U|997
*
4V57|1|CA|A|1044
4V57|1|CA|C|1045
4V57|1|CA|A|1046
4V57|1|CA|G|1047
*
4V57|1|CA|C|1210
4V57|1|CA|U|1211
4V57|1|CA|U|1212
4V57|1|CA|A|1213
4V57|1|CA|C|1214
4V57|1|CA|G|1215

Current chains

Chain CA

16S rRNA

Nearby chains

Chain BB

Large subunit ribosomal RNA; LSU rRNA

Chain CN

30S ribosomal protein S14