J3_4V5G_039

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GUG*CGAGUAC*GGAAUC

Length

16 nucleotides

Bulged bases

4V5G|1|DA|U|272|||A, 4V5G|1|DA|G|370

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5G|1|DA|G|272
4V5G|1|DA|U|272|||A
4V5G|1|DA|G|272|||B
*
4V5G|1|DA|C|366
4V5G|1|DA|G|370
4V5G|1|DA|A|371
4V5G|1|DA|G|372
4V5G|1|DA|U|373
4V5G|1|DA|A|374
4V5G|1|DA|C|375
*
4V5G|1|DA|G|399
4V5G|1|DA|G|400
4V5G|1|DA|A|401
4V5G|1|DA|A|402
4V5G|1|DA|U|403
4V5G|1|DA|C|404

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain D1

50S RIBOSOMAL PROTEIN L28