3D structure

PDB id
4V5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GUCGUCAG*CGCAACCC*GGACGACGUC
Length
26 nucleotides
Bulged bases
4V5G|1|AA|G|1190
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5G|1|AA|G|1061
4V5G|1|AA|U|1062
4V5G|1|AA|C|1063
4V5G|1|AA|G|1064
4V5G|1|AA|U|1065
4V5G|1|AA|C|1066
4V5G|1|AA|A|1067
4V5G|1|AA|G|1068
*
4V5G|1|AA|C|1107
4V5G|1|AA|G|1108
4V5G|1|AA|C|1109
4V5G|1|AA|A|1110
4V5G|1|AA|A|1111
4V5G|1|AA|C|1112
4V5G|1|AA|C|1113
4V5G|1|AA|C|1114
*
4V5G|1|AA|G|1186
4V5G|1|AA|G|1187
4V5G|1|AA|A|1188
4V5G|1|AA|C|1189
4V5G|1|AA|G|1190
4V5G|1|AA|A|1191
4V5G|1|AA|C|1192
4V5G|1|AA|G|1193
4V5G|1|AA|U|1194
4V5G|1|AA|C|1195

Current chains

Chain AA
16S RIBOSOMAL RNA

Nearby chains

Chain AB
30S RIBOSOMAL PROTEIN S2
Chain AC
30S RIBOSOMAL PROTEIN S3
Chain AE
30S RIBOSOMAL PROTEIN S5
Chain AG
30S RIBOSOMAL PROTEIN S7
Chain AI
30S RIBOSOMAL PROTEIN S9
Chain AJ
30S RIBOSOMAL PROTEIN S10
Chain AN
30S RIBOSOMAL PROTEIN S14 TYPE Z
Chain AX
MRNA

Coloring options:

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