J3_4V5G_056

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

AC*GAUAAGCC*GGAUGU

Length

16 nucleotides

Bulged bases

4V5G|1|BA|U|72, 4V5G|1|BA|A|74

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5G|1|BA|A|56
4V5G|1|BA|C|57
*
4V5G|1|BA|G|70
4V5G|1|BA|A|71
4V5G|1|BA|U|72
4V5G|1|BA|A|73
4V5G|1|BA|A|74
4V5G|1|BA|G|75
4V5G|1|BA|C|76
4V5G|1|BA|C|77
*
4V5G|1|BA|G|109
4V5G|1|BA|G|110
4V5G|1|BA|A|111
4V5G|1|BA|U|112
4V5G|1|BA|G|113
4V5G|1|BA|U|114

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S RIBOSOMAL PROTEIN L29

Chain B7

50S RIBOSOMAL PROTEIN L34

Chain BX

50S RIBOSOMAL PROTEIN L23