J3_4V5K_028

3D structure

PDB id

4V5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUUGACAUGC*GCACAG*CUUACG

Length

22 nucleotides

Bulged bases

4V5K|1|CA|U|1212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5K|1|CA|C|990
4V5K|1|CA|U|991
4V5K|1|CA|U|992
4V5K|1|CA|G|993
4V5K|1|CA|A|994
4V5K|1|CA|C|995
4V5K|1|CA|A|996
4V5K|1|CA|U|997
4V5K|1|CA|G|998
4V5K|1|CA|C|999
*
4V5K|1|CA|G|1042
4V5K|1|CA|C|1043
4V5K|1|CA|A|1044
4V5K|1|CA|C|1045
4V5K|1|CA|A|1046
4V5K|1|CA|G|1047
*
4V5K|1|CA|C|1210
4V5K|1|CA|U|1211
4V5K|1|CA|U|1212
4V5K|1|CA|A|1213
4V5K|1|CA|C|1214
4V5K|1|CA|G|1215

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CN

30S RIBOSOMAL PROTEIN S14 TYPE Z