J3_4V5K_047
3D structure
- PDB id
- 4V5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UGGAAUU*AGGAACGCCGAUGG*CAG
- Length
- 24 nucleotides
- Bulged bases
- 4V5K|1|AA|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5K|1|AA|U|672
4V5K|1|AA|G|673
4V5K|1|AA|G|674
4V5K|1|AA|A|675
4V5K|1|AA|A|676
4V5K|1|AA|U|677
4V5K|1|AA|U|678
*
4V5K|1|AA|A|712
4V5K|1|AA|G|713
4V5K|1|AA|G|714
4V5K|1|AA|A|715
4V5K|1|AA|A|716
4V5K|1|AA|C|717
4V5K|1|AA|G|718
4V5K|1|AA|C|719
4V5K|1|AA|C|720
4V5K|1|AA|G|721
4V5K|1|AA|A|722
4V5K|1|AA|U|723
4V5K|1|AA|G|724
4V5K|1|AA|G|725
*
4V5K|1|AA|C|732
4V5K|1|AA|A|733
4V5K|1|AA|G|734
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AF
- 30S RIBOSOMAL PROTEIN S6
- Chain AK
- 30S RIBOSOMAL PROTEIN S11
- Chain AO
- 30S RIBOSOMAL PROTEIN S15
- Chain AR
- 30S RIBOSOMAL PROTEIN S18
- Chain BD
- 50S RIBOSOMAL PROTEIN L2
Coloring options: