J3_4V5N_026

3D structure

PDB id

4V5N (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

CCAUAG*CGC*GUCG

Length

13 nucleotides

Bulged bases

4V5N|1|BB|C|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5N|1|BB|C|11
4V5N|1|BB|C|12
4V5N|1|BB|A|13
4V5N|1|BB|U|14
4V5N|1|BB|A|15
4V5N|1|BB|G|16
*
4V5N|1|BB|C|68
4V5N|1|BB|G|69
4V5N|1|BB|C|70
*
4V5N|1|BB|G|107
4V5N|1|BB|U|108
4V5N|1|BB|C|109
4V5N|1|BB|G|110

Current chains

Chain BB

5S RIBOSOMAL RNA

Nearby chains

Chain B0

50S RIBOSOMAL PROTEIN L27

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BS

50S RIBOSOMAL PROTEIN L18

Chain BZ

50S RIBOSOMAL PROTEIN L25