J3_4V5P_057

3D structure

PDB id

4V5P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAAG*CG*CCCCGUAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5P|1|BA|C|297
4V5P|1|BA|G|298
4V5P|1|BA|A|299
4V5P|1|BA|A|300
4V5P|1|BA|G|301
*
4V5P|1|BA|C|316
4V5P|1|BA|G|317
*
4V5P|1|BA|C|334
4V5P|1|BA|C|335
4V5P|1|BA|C|336
4V5P|1|BA|C|337
4V5P|1|BA|G|338
4V5P|1|BA|U|339
4V5P|1|BA|A|340
4V5P|1|BA|G|341

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BF

50S RIBOSOMAL PROTEIN L4

Chain BY

50S RIBOSOMAL PROTEIN L24