J3_4V6E_056

3D structure

PDB id

4V6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6E|1|AA|G|1003
4V6E|1|AA|A|1004
4V6E|1|AA|A|1005
4V6E|1|AA|G|1006
*
4V6E|1|AA|U|1023
4V6E|1|AA|G|1024
4V6E|1|AA|U|1025
4V6E|1|AA|G|1026
4V6E|1|AA|C|1027
4V6E|1|AA|C|1028
*
4V6E|1|AA|G|1033
4V6E|1|AA|G|1034
4V6E|1|AA|A|1035
4V6E|1|AA|A|1036
4V6E|1|AA|C|1037

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S14