J3_4V6E_069

3D structure

PDB id

4V6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

UCGACCC*GGAAA*UA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6E|1|DA|U|1344
4V6E|1|DA|C|1345
4V6E|1|DA|G|1346
4V6E|1|DA|A|1347
4V6E|1|DA|C|1348
4V6E|1|DA|C|1349
4V6E|1|DA|C|1350
*
4V6E|1|DA|G|1381
4V6E|1|DA|G|1382
4V6E|1|DA|A|1383
4V6E|1|DA|A|1384
4V6E|1|DA|A|1385
*
4V6E|1|DA|U|1402
4V6E|1|DA|A|1403

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DT

50S ribosomal protein L23