J3_4V6G_040

3D structure

PDB id

4V6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of 70S ribosome with two tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGC*GGACU*GGAAGGAG

Length

16 nucleotides

Bulged bases

4V6G|1|CA|A|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6G|1|CA|C|1116
4V6G|1|CA|G|1117
4V6G|1|CA|C|1118
*
4V6G|1|CA|G|1155
4V6G|1|CA|G|1156
4V6G|1|CA|A|1157
4V6G|1|CA|C|1158
4V6G|1|CA|U|1159
*
4V6G|1|CA|G|1177
4V6G|1|CA|G|1178
4V6G|1|CA|A|1179
4V6G|1|CA|A|1180
4V6G|1|CA|G|1181
4V6G|1|CA|G|1182
4V6G|1|CA|A|1183
4V6G|1|CA|G|1184

Current chains

Chain CA

16S RRNA (E.COLI NUMBERING)

Nearby chains

Chain CE

30S RIBOSOMAL PROTEIN S2

Chain CL

30S RIBOSOMAL PROTEIN S9

Chain CM

30S RIBOSOMAL PROTEIN S10

Chain CQ

30S RIBOSOMAL PROTEIN S14