J3_4V6G_062

3D structure

PDB id

4V6G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of 70S ribosome with two tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GUG*CGAGUAC*GGAAUC

Length

16 nucleotides

Bulged bases

4V6G|1|BA|U|271|||C, 4V6G|1|BA|G|370

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6G|1|BA|G|271|||B
4V6G|1|BA|U|271|||C
4V6G|1|BA|G|271
*
4V6G|1|BA|C|366
4V6G|1|BA|G|370
4V6G|1|BA|A|371
4V6G|1|BA|G|372
4V6G|1|BA|U|373
4V6G|1|BA|A|374
4V6G|1|BA|C|375
*
4V6G|1|BA|G|399
4V6G|1|BA|G|400
4V6G|1|BA|A|401
4V6G|1|BA|A|402
4V6G|1|BA|U|403
4V6G|1|BA|C|404

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BK

50S ribosomal protein L9

Chain BZ

50S ribosomal protein L28