J3_4V7K_049

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

4V7K|1|Aa|U|1212, 4V7K|1|Aa|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|Aa|C|990
4V7K|1|Aa|U|991
4V7K|1|Aa|U|992
4V7K|1|Aa|G|993
4V7K|1|Aa|A|994
4V7K|1|Aa|C|995
4V7K|1|Aa|A|996
4V7K|1|Aa|U|997
4V7K|1|Aa|G|998
*
4V7K|1|Aa|C|1043
4V7K|1|Aa|A|1044
4V7K|1|Aa|C|1045
4V7K|1|Aa|A|1046
4V7K|1|Aa|G|1047
*
4V7K|1|Aa|C|1210
4V7K|1|Aa|U|1211
4V7K|1|Aa|U|1212
4V7K|1|Aa|A|1213
4V7K|1|Aa|C|1214
4V7K|1|Aa|G|1215

Current chains

Chain Aa

RNA (1504-MER)

Nearby chains

Chain An

30S ribosomal protein S14 type Z

Chain Ay

Toxin relE

Chain BA

Large subunit ribosomal RNA; LSU rRNA