J3_4V7K_068

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UGCC*GGUGUUG*CGCAA

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|Ba|U|1073
4V7K|1|Ba|G|1074
4V7K|1|Ba|C|1075
4V7K|1|Ba|C|1076
*
4V7K|1|Ba|G|1081
4V7K|1|Ba|G|1082
4V7K|1|Ba|U|1083
4V7K|1|Ba|G|1084
4V7K|1|Ba|U|1085
4V7K|1|Ba|U|1086
4V7K|1|Ba|G|1087
*
4V7K|1|Ba|C|1098
4V7K|1|Ba|G|1099
4V7K|1|Ba|C|1100
4V7K|1|Ba|A|1101
4V7K|1|Ba|A|1102

Current chains

Chain Ba

RNA (1504-MER)

Nearby chains

Chain Bb

30S ribosomal protein S2

Chain Be

30S ribosomal protein S5