J3_4V7L_021

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUGACAUGCU*AGCACAG*CUUACG

Length

24 nucleotides

Bulged bases

4V7L|1|CA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|CA|C|990
4V7L|1|CA|U|991
4V7L|1|CA|U|992
4V7L|1|CA|G|993
4V7L|1|CA|A|994
4V7L|1|CA|C|995
4V7L|1|CA|A|996
4V7L|1|CA|U|997
4V7L|1|CA|G|998
4V7L|1|CA|C|999
4V7L|1|CA|U|1000
*
4V7L|1|CA|A|1041
4V7L|1|CA|G|1042
4V7L|1|CA|C|1043
4V7L|1|CA|A|1044
4V7L|1|CA|C|1045
4V7L|1|CA|A|1046
4V7L|1|CA|G|1047
*
4V7L|1|CA|C|1210
4V7L|1|CA|U|1211
4V7L|1|CA|U|1212
4V7L|1|CA|A|1213
4V7L|1|CA|C|1214
4V7L|1|CA|G|1215

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CN

30S ribosomal protein S14