J3_4V7L_030

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCUCAG*CGGAGAG*UAGAAGG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|DA|C|2294
4V7L|1|DA|C|2295
4V7L|1|DA|U|2296
4V7L|1|DA|C|2297
4V7L|1|DA|A|2298
4V7L|1|DA|G|2299
*
4V7L|1|DA|C|2317
4V7L|1|DA|G|2318
4V7L|1|DA|G|2319
4V7L|1|DA|A|2320
4V7L|1|DA|G|2321
4V7L|1|DA|A|2322
4V7L|1|DA|G|2323
*
4V7L|1|DA|U|2332
4V7L|1|DA|A|2333
4V7L|1|DA|G|2334
4V7L|1|DA|A|2335
4V7L|1|DA|A|2336
4V7L|1|DA|G|2337
4V7L|1|DA|G|2338

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CX

Transfer RNA; tRNA

Chain D0

50S ribosomal protein L27

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DG

50S ribosomal protein L5

Chain DS

50S ribosomal protein L18