J3_4V7L_054

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGGAAU*GGAACGCCGAUGG*CAG

Length

22 nucleotides

Bulged bases

4V7L|1|CA|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|CA|U|672
4V7L|1|CA|G|673
4V7L|1|CA|G|674
4V7L|1|CA|A|675
4V7L|1|CA|A|676
4V7L|1|CA|U|677
*
4V7L|1|CA|G|713
4V7L|1|CA|G|714
4V7L|1|CA|A|715
4V7L|1|CA|A|716
4V7L|1|CA|C|717
4V7L|1|CA|G|718
4V7L|1|CA|C|719
4V7L|1|CA|C|720
4V7L|1|CA|G|721
4V7L|1|CA|A|722
4V7L|1|CA|U|723
4V7L|1|CA|G|724
4V7L|1|CA|G|725
*
4V7L|1|CA|C|732
4V7L|1|CA|A|733
4V7L|1|CA|G|734

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CF

30S ribosomal protein S6

Chain CK

30S ribosomal protein S11

Chain CO

30S ribosomal protein S15

Chain CR

30S ribosomal protein S18

Chain DD

50S ribosomal protein L2