J3_4V7P_006

3D structure

PDB id

4V7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Recognition of the amber stop codon by release factor RF1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

GAAC*GGUGC*GAGC

Length

13 nucleotides

Bulged bases

4V7P|1|AA|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7P|1|AA|G|1003
4V7P|1|AA|A|1004
4V7P|1|AA|A|1005
4V7P|1|AA|C|1006
*
4V7P|1|AA|G|1023
4V7P|1|AA|G|1024
4V7P|1|AA|U|1025
4V7P|1|AA|G|1026
4V7P|1|AA|C|1027
*
4V7P|1|AA|G|1034
4V7P|1|AA|A|1035
4V7P|1|AA|G|1036
4V7P|1|AA|C|1037

Current chains

Chain AA

16S rRNA (1504-MER)

Nearby chains