3D structure

PDB id
4V7U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to erythromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GAC*GAUAAGCG*CGAUUUC
Length
18 nucleotides
Bulged bases
4V7U|1|DA|A|74
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7U|1|DA|G|55
4V7U|1|DA|A|56
4V7U|1|DA|C|57
*
4V7U|1|DA|G|70
4V7U|1|DA|A|71
4V7U|1|DA|U|72
4V7U|1|DA|A|73
4V7U|1|DA|A|74
4V7U|1|DA|G|75
4V7U|1|DA|C|76
4V7U|1|DA|G|77
*
4V7U|1|DA|C|109
4V7U|1|DA|G|110
4V7U|1|DA|A|111
4V7U|1|DA|U|112
4V7U|1|DA|U|113
4V7U|1|DA|U|114
4V7U|1|DA|C|115

Current chains

Chain DA
23S rRNA

Nearby chains

Chain D2
50S ribosomal protein L34
Chain DT
50S ribosomal protein L23
Chain DY
50S ribosomal protein L29

Coloring options:

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