J3_4V7U_028

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUGAUCUA*UGG*CAAAC

Length

16 nucleotides

Bulged bases

4V7U|1|DA|U|686, 4V7U|1|DA|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|DA|G|682
4V7U|1|DA|U|683
4V7U|1|DA|G|684
4V7U|1|DA|A|685
4V7U|1|DA|U|686
4V7U|1|DA|C|687
4V7U|1|DA|U|688
4V7U|1|DA|A|689
*
4V7U|1|DA|U|773
4V7U|1|DA|G|774
4V7U|1|DA|G|775
*
4V7U|1|DA|C|791
4V7U|1|DA|A|792
4V7U|1|DA|A|793
4V7U|1|DA|A|794
4V7U|1|DA|C|795

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34

Chain DC

50S ribosomal protein L2

Chain DE

50S ribosomal protein L4