J3_4V7U_037

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCCGUAGCG*UAGCGC*GGAAC

Length

20 nucleotides

Bulged bases

4V7U|1|DB|U|14

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|DB|G|10
4V7U|1|DB|C|11
4V7U|1|DB|C|12
4V7U|1|DB|G|13
4V7U|1|DB|U|14
4V7U|1|DB|A|15
4V7U|1|DB|G|16
4V7U|1|DB|C|17
4V7U|1|DB|G|18
*
4V7U|1|DB|U|65
4V7U|1|DB|A|66
4V7U|1|DB|G|67
4V7U|1|DB|C|68
4V7U|1|DB|G|69
4V7U|1|DB|C|70
*
4V7U|1|DB|G|106
4V7U|1|DB|G|107
4V7U|1|DB|A|108
4V7U|1|DB|A|109
4V7U|1|DB|C|110

Current chains

Chain DB

5S rRNA

Nearby chains

Chain DA

Large subunit ribosomal RNA; LSU rRNA

Chain DO

50S ribosomal protein L18

Chain DV

50S ribosomal protein L25

Chain DW

50S ribosomal protein L27