J3_4V7U_060

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCCUAAC*GGGGAAUAUUG*CAGC

Length

22 nucleotides

Bulged bases

4V7U|1|CA|C|48, 4V7U|1|CA|A|51, 4V7U|1|CA|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|CA|G|46
4V7U|1|CA|C|47
4V7U|1|CA|C|48
4V7U|1|CA|U|49
4V7U|1|CA|A|50
4V7U|1|CA|A|51
4V7U|1|CA|C|52
*
4V7U|1|CA|G|359
4V7U|1|CA|G|360
4V7U|1|CA|G|361
4V7U|1|CA|G|362
4V7U|1|CA|A|363
4V7U|1|CA|A|364
4V7U|1|CA|U|365
4V7U|1|CA|A|366
4V7U|1|CA|U|367
4V7U|1|CA|U|368
4V7U|1|CA|G|369
*
4V7U|1|CA|C|392
4V7U|1|CA|A|393
4V7U|1|CA|G|394
4V7U|1|CA|C|395

Current chains

Chain CA

16S rRNA

Nearby chains

Chain BH

50S ribosomal protein L9

Chain CL

30S ribosomal protein S12

Chain CP

30S ribosomal protein S16