3D structure

PDB id
4V7U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to erythromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GUAGAAU*GGAAUACCGGUGG*CGGC
Length
24 nucleotides
Bulged bases
4V7U|1|CA|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7U|1|CA|G|671
4V7U|1|CA|U|672
4V7U|1|CA|A|673
4V7U|1|CA|G|674
4V7U|1|CA|A|675
4V7U|1|CA|A|676
4V7U|1|CA|U|677
*
4V7U|1|CA|G|713
4V7U|1|CA|G|714
4V7U|1|CA|A|715
4V7U|1|CA|A|716
4V7U|1|CA|U|717
4V7U|1|CA|A|718
4V7U|1|CA|C|719
4V7U|1|CA|C|720
4V7U|1|CA|G|721
4V7U|1|CA|G|722
4V7U|1|CA|U|723
4V7U|1|CA|G|724
4V7U|1|CA|G|725
*
4V7U|1|CA|C|732
4V7U|1|CA|G|733
4V7U|1|CA|G|734
4V7U|1|CA|C|735

Current chains

Chain CA
16S rRNA

Nearby chains

Chain CF
30S ribosomal protein S6
Chain CK
30S ribosomal protein S11
Chain CO
30S ribosomal protein S15
Chain CR
30S ribosomal protein S18
Chain CU
30S ribosomal protein S21
Chain DC
50S ribosomal protein L2

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.7035 s