J3_4V7U_071

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUGGAUGC*GCGAAAAGAAC*GAGUGAAAAAGAACCUGAAAC

Length

40 nucleotides

Bulged bases

4V7U|1|DA|A|504, 4V7U|1|DA|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|DA|G|24
4V7U|1|DA|U|25
4V7U|1|DA|G|26
4V7U|1|DA|G|27
4V7U|1|DA|A|28
4V7U|1|DA|U|29
4V7U|1|DA|G|30
4V7U|1|DA|C|31
*
4V7U|1|DA|G|474
4V7U|1|DA|C|475
4V7U|1|DA|G|476
4V7U|1|DA|A|477
4V7U|1|DA|A|478
4V7U|1|DA|A|479
4V7U|1|DA|A|480
4V7U|1|DA|G|481
4V7U|1|DA|A|482
4V7U|1|DA|A|483
4V7U|1|DA|C|484
*
4V7U|1|DA|G|496
4V7U|1|DA|A|497
4V7U|1|DA|G|498
4V7U|1|DA|U|499
4V7U|1|DA|G|500
4V7U|1|DA|A|501
4V7U|1|DA|A|502
4V7U|1|DA|A|503
4V7U|1|DA|A|504
4V7U|1|DA|A|505
4V7U|1|DA|G|506
4V7U|1|DA|A|507
4V7U|1|DA|A|508
4V7U|1|DA|C|509
4V7U|1|DA|C|510
4V7U|1|DA|U|511
4V7U|1|DA|G|512
4V7U|1|DA|A|513
4V7U|1|DA|A|514
4V7U|1|DA|A|515
4V7U|1|DA|C|516

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D0

50S ribosomal protein L32

Chain DQ

50S ribosomal protein L20

Chain DS

50S ribosomal protein L22

Chain DU

50S ribosomal protein L24