J3_4V7W_058

3D structure

PDB id

4V7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAAUG*CCCAGUUCGGAUU*AUGAAGCCG

Length

27 nucleotides

Bulged bases

4V7W|1|CA|U|1240, 4V7W|1|CA|U|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7W|1|CA|C|1237
4V7W|1|CA|A|1238
4V7W|1|CA|A|1239
4V7W|1|CA|U|1240
4V7W|1|CA|G|1241
*
4V7W|1|CA|C|1296
4V7W|1|CA|C|1297
4V7W|1|CA|C|1298
4V7W|1|CA|A|1299
4V7W|1|CA|G|1300
4V7W|1|CA|U|1301
4V7W|1|CA|U|1302
4V7W|1|CA|C|1303
4V7W|1|CA|G|1304
4V7W|1|CA|G|1305
4V7W|1|CA|A|1306
4V7W|1|CA|U|1307
4V7W|1|CA|U|1308
*
4V7W|1|CA|A|1329
4V7W|1|CA|U|1330
4V7W|1|CA|G|1331
4V7W|1|CA|A|1332
4V7W|1|CA|A|1333
4V7W|1|CA|G|1334
4V7W|1|CA|C|1335
4V7W|1|CA|C|1336
4V7W|1|CA|G|1337

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CG

30S ribosomal protein S7

Chain CM

30S ribosomal protein S13

Chain CU

30S ribosomal protein Thx