J3_4V7X_033

3D structure

PDB id

4V7X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGG*CUAG*CG

Length

9 nucleotides

Bulged bases

4V7X|1|AA|A|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V7X_033 not in the Motif Atlas

Geometric match to J3_4LFB_011

Geometric discrepancy: 0.0967

The information below is about J3_4LFB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_01633.1

Basepair signature

cWW-F-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

4V7X|1|AA|C|586
4V7X|1|AA|G|587
4V7X|1|AA|G|588
*
4V7X|1|AA|C|651
4V7X|1|AA|U|652
4V7X|1|AA|A|653
4V7X|1|AA|G|654
*
4V7X|1|AA|C|754
4V7X|1|AA|G|755

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AH

30S ribosomal protein S8

Chain AL

30S ribosomal protein S12

Chain AO

30S ribosomal protein S15

Chain AQ

30S ribosomal protein S17