J3_4V7Y_034

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCCUAAG*UAGGAAUCUUC*GAGC

Length

22 nucleotides

Bulged bases

4V7Y|1|AA|C|48, 4V7Y|1|AA|A|50, 4V7Y|1|AA|A|51, 4V7Y|1|AA|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7Y|1|AA|G|46
4V7Y|1|AA|C|47
4V7Y|1|AA|C|48
4V7Y|1|AA|U|49
4V7Y|1|AA|A|50
4V7Y|1|AA|A|51
4V7Y|1|AA|G|52
*
4V7Y|1|AA|U|359
4V7Y|1|AA|A|360
4V7Y|1|AA|G|361
4V7Y|1|AA|G|362
4V7Y|1|AA|A|363
4V7Y|1|AA|A|364
4V7Y|1|AA|U|365
4V7Y|1|AA|C|366
4V7Y|1|AA|U|367
4V7Y|1|AA|U|368
4V7Y|1|AA|C|369
*
4V7Y|1|AA|G|392
4V7Y|1|AA|A|393
4V7Y|1|AA|G|394
4V7Y|1|AA|C|395

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AP

30S ribosomal protein S16