3D structure

PDB id
4V85 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GUUUAAUUC*GAAGAACCUUAC*GGCUAC
Length
27 nucleotides
Bulged bases
4V85|1|AA|A|975, 4V85|1|AA|G|976, 4V85|1|AA|A|978
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V85|1|AA|G|954
4V85|1|AA|U|955
4V85|1|AA|U|956
4V85|1|AA|U|957
4V85|1|AA|A|958
4V85|1|AA|A|959
4V85|1|AA|U|960
4V85|1|AA|U|961
4V85|1|AA|C|962
*
4V85|1|AA|G|973
4V85|1|AA|A|974
4V85|1|AA|A|975
4V85|1|AA|G|976
4V85|1|AA|A|977
4V85|1|AA|A|978
4V85|1|AA|C|979
4V85|1|AA|C|980
4V85|1|AA|U|981
4V85|1|AA|U|982
4V85|1|AA|A|983
4V85|1|AA|C|984
*
4V85|1|AA|G|1221
4V85|1|AA|G|1222
4V85|1|AA|C|1223
4V85|1|AA|U|1224
4V85|1|AA|A|1225
4V85|1|AA|C|1226

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AJ
30S ribosomal protein S10
Chain AM
30S ribosomal protein S13
Chain AN
30S ribosomal protein S14
Chain AS
30S ribosomal protein S19

Coloring options:

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