J3_4V85_005

3D structure

PDB id

4V85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V85_005 not in the Motif Atlas

Geometric match to J3_5J7L_053

Geometric discrepancy: 0.1439

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4V85|1|AA|C|990
4V85|1|AA|U|991
4V85|1|AA|U|992
4V85|1|AA|G|993
4V85|1|AA|A|994
4V85|1|AA|C|995
4V85|1|AA|A|996
4V85|1|AA|U|997
*
4V85|1|AA|A|1044
4V85|1|AA|C|1045
4V85|1|AA|A|1046
4V85|1|AA|G|1047
*
4V85|1|AA|C|1210
4V85|1|AA|U|1211
4V85|1|AA|U|1212
4V85|1|AA|A|1213
4V85|1|AA|C|1214
4V85|1|AA|G|1215

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S14